Deep Learning Segmentation of the Nucleus Basalis of Meynert on 3T MRI

D.J. Doss; G.W. Johnson; S. Narasimhan; J.S. Shless; J.W. Jiang; H.F.J. González; D.L. Paulo; A. Lucas; K.A. Davis; C. Chang; V.L. Morgan; C. Constantinidis; B.M. Dawant; D.J. Englot

doi:10.3174/ajnr.A7950

Research ArticleAdult Brain

Open Access

Deep Learning Segmentation of the Nucleus Basalis of Meynert on 3T MRI

D.J. Doss, G.W. Johnson, S. Narasimhan, J.S. Shless, J.W. Jiang, H.F.J. González, D.L. Paulo, A. Lucas, K.A. Davis, C. Chang, V.L. Morgan, C. Constantinidis, B.M. Dawant and D.J. Englot

American Journal of Neuroradiology September 2023, 44 (9) 1020-1025; DOI: https://doi.org/10.3174/ajnr.A7950

D.J. Doss

aFrom the Department of Biomedical Engineering (D.J.D., G.W.J., S.N., H.F.J.G., C. Chang., V.L.M., C. Constantinidis, D.J.E.), Vanderbilt University, Nashville, Tennessee

bInstitute of Imaging Science (D.J.D., G.W.J., S.N., J.S.S., J.W.J., H.F.J.G., C. Chang, V.L.M., B.M.D., D.J.E.), Vanderbilt University, Nashville, Tennessee

cVanderbilt Institute for Surgery and Engineering (D.J.D., G.W.J., S.N., H.F.J.G., C. Chang, V.L.M., B.M.D., D.J.E.), Nashville, Tennessee

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for D.J. Doss

G.W. Johnson

aFrom the Department of Biomedical Engineering (D.J.D., G.W.J., S.N., H.F.J.G., C. Chang., V.L.M., C. Constantinidis, D.J.E.), Vanderbilt University, Nashville, Tennessee

bInstitute of Imaging Science (D.J.D., G.W.J., S.N., J.S.S., J.W.J., H.F.J.G., C. Chang, V.L.M., B.M.D., D.J.E.), Vanderbilt University, Nashville, Tennessee

cVanderbilt Institute for Surgery and Engineering (D.J.D., G.W.J., S.N., H.F.J.G., C. Chang, V.L.M., B.M.D., D.J.E.), Nashville, Tennessee

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for G.W. Johnson

S. Narasimhan

aFrom the Department of Biomedical Engineering (D.J.D., G.W.J., S.N., H.F.J.G., C. Chang., V.L.M., C. Constantinidis, D.J.E.), Vanderbilt University, Nashville, Tennessee

bInstitute of Imaging Science (D.J.D., G.W.J., S.N., J.S.S., J.W.J., H.F.J.G., C. Chang, V.L.M., B.M.D., D.J.E.), Vanderbilt University, Nashville, Tennessee

cVanderbilt Institute for Surgery and Engineering (D.J.D., G.W.J., S.N., H.F.J.G., C. Chang, V.L.M., B.M.D., D.J.E.), Nashville, Tennessee

dDepartment of Neurological Surgery (S.N., J.S.S., J.W.J., D.L.P., V.L.M., D.J.E.), Vanderbilt University Medical Center, Nashville, Tennessee

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for S. Narasimhan

J.S. Shless

bInstitute of Imaging Science (D.J.D., G.W.J., S.N., J.S.S., J.W.J., H.F.J.G., C. Chang, V.L.M., B.M.D., D.J.E.), Vanderbilt University, Nashville, Tennessee

dDepartment of Neurological Surgery (S.N., J.S.S., J.W.J., D.L.P., V.L.M., D.J.E.), Vanderbilt University Medical Center, Nashville, Tennessee

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for J.S. Shless

J.W. Jiang

bInstitute of Imaging Science (D.J.D., G.W.J., S.N., J.S.S., J.W.J., H.F.J.G., C. Chang, V.L.M., B.M.D., D.J.E.), Vanderbilt University, Nashville, Tennessee

dDepartment of Neurological Surgery (S.N., J.S.S., J.W.J., D.L.P., V.L.M., D.J.E.), Vanderbilt University Medical Center, Nashville, Tennessee

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

H.F.J. González

aFrom the Department of Biomedical Engineering (D.J.D., G.W.J., S.N., H.F.J.G., C. Chang., V.L.M., C. Constantinidis, D.J.E.), Vanderbilt University, Nashville, Tennessee

bInstitute of Imaging Science (D.J.D., G.W.J., S.N., J.S.S., J.W.J., H.F.J.G., C. Chang, V.L.M., B.M.D., D.J.E.), Vanderbilt University, Nashville, Tennessee

cVanderbilt Institute for Surgery and Engineering (D.J.D., G.W.J., S.N., H.F.J.G., C. Chang, V.L.M., B.M.D., D.J.E.), Nashville, Tennessee

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for H.F.J. González

D.L. Paulo

dDepartment of Neurological Surgery (S.N., J.S.S., J.W.J., D.L.P., V.L.M., D.J.E.), Vanderbilt University Medical Center, Nashville, Tennessee

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for D.L. Paulo

A. Lucas

kDepartment of Bioengineering (A.L.), University of Pennsylvania, Philadelphia, Pennsylvania

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for A. Lucas

K.A. Davis

lDepartment of Neuroscience (K.A.D.), University of Pennsylvania, Philadelphia, Pennsylvania

mCenter for Neuroengineering and Therapeutics (K.A.D.), University of Pennsylvania, Philadelphia, Pennsylvania

nNeurology (K.A.D.), University of Pennsylvania, Philadelphia, Pennsylvania

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for K.A. Davis

C. Chang

aFrom the Department of Biomedical Engineering (D.J.D., G.W.J., S.N., H.F.J.G., C. Chang., V.L.M., C. Constantinidis, D.J.E.), Vanderbilt University, Nashville, Tennessee

bInstitute of Imaging Science (D.J.D., G.W.J., S.N., J.S.S., J.W.J., H.F.J.G., C. Chang, V.L.M., B.M.D., D.J.E.), Vanderbilt University, Nashville, Tennessee

cVanderbilt Institute for Surgery and Engineering (D.J.D., G.W.J., S.N., H.F.J.G., C. Chang, V.L.M., B.M.D., D.J.E.), Nashville, Tennessee

eDepartment of Electrical and Computer Engineering (C. Chang, B.M.D., D.J.E.), Vanderbilt University, Nashville, Tennessee

fDepartment of Computer Science (C. Chang), Vanderbilt University, Nashville, Tennessee

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for C. Chang

V.L. Morgan

aFrom the Department of Biomedical Engineering (D.J.D., G.W.J., S.N., H.F.J.G., C. Chang., V.L.M., C. Constantinidis, D.J.E.), Vanderbilt University, Nashville, Tennessee

bInstitute of Imaging Science (D.J.D., G.W.J., S.N., J.S.S., J.W.J., H.F.J.G., C. Chang, V.L.M., B.M.D., D.J.E.), Vanderbilt University, Nashville, Tennessee

cVanderbilt Institute for Surgery and Engineering (D.J.D., G.W.J., S.N., H.F.J.G., C. Chang, V.L.M., B.M.D., D.J.E.), Nashville, Tennessee

dDepartment of Neurological Surgery (S.N., J.S.S., J.W.J., D.L.P., V.L.M., D.J.E.), Vanderbilt University Medical Center, Nashville, Tennessee

gDepartment of Neurology (V.L.M.), Vanderbilt University Medical Center, Nashville, Tennessee

hDepartment of Radiological Sciences (V.L.M., D.J.E.), Vanderbilt University Medical Center, Nashville, Tennessee

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for V.L. Morgan

C. Constantinidis

aFrom the Department of Biomedical Engineering (D.J.D., G.W.J., S.N., H.F.J.G., C. Chang., V.L.M., C. Constantinidis, D.J.E.), Vanderbilt University, Nashville, Tennessee

iDepartment of Ophthalmology and Visual Sciences (C. Constantinidis), Vanderbilt University Medical Center, Nashville, Tennessee

jDepartment of Neuroscience (C. Constantinidis), Vanderbilt University, Nashville, Tennessee

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for C. Constantinidis

B.M. Dawant

bInstitute of Imaging Science (D.J.D., G.W.J., S.N., J.S.S., J.W.J., H.F.J.G., C. Chang, V.L.M., B.M.D., D.J.E.), Vanderbilt University, Nashville, Tennessee

cVanderbilt Institute for Surgery and Engineering (D.J.D., G.W.J., S.N., H.F.J.G., C. Chang, V.L.M., B.M.D., D.J.E.), Nashville, Tennessee

eDepartment of Electrical and Computer Engineering (C. Chang, B.M.D., D.J.E.), Vanderbilt University, Nashville, Tennessee

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for B.M. Dawant

D.J. Englot

aFrom the Department of Biomedical Engineering (D.J.D., G.W.J., S.N., H.F.J.G., C. Chang., V.L.M., C. Constantinidis, D.J.E.), Vanderbilt University, Nashville, Tennessee

bInstitute of Imaging Science (D.J.D., G.W.J., S.N., J.S.S., J.W.J., H.F.J.G., C. Chang, V.L.M., B.M.D., D.J.E.), Vanderbilt University, Nashville, Tennessee

cVanderbilt Institute for Surgery and Engineering (D.J.D., G.W.J., S.N., H.F.J.G., C. Chang, V.L.M., B.M.D., D.J.E.), Nashville, Tennessee

dDepartment of Neurological Surgery (S.N., J.S.S., J.W.J., D.L.P., V.L.M., D.J.E.), Vanderbilt University Medical Center, Nashville, Tennessee

eDepartment of Electrical and Computer Engineering (C. Chang, B.M.D., D.J.E.), Vanderbilt University, Nashville, Tennessee

hDepartment of Radiological Sciences (V.L.M., D.J.E.), Vanderbilt University Medical Center, Nashville, Tennessee

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for D.J. Englot

Article
Figures & Data
Supplemental
Info & Metrics
Responses
References
PDF

Submit a Response to This Article

Compose eLetter

Title *

Contents

More information about text formats

Plain text

No HTML tags allowed.
Web page addresses and e-mail addresses turn into links automatically.
Lines and paragraphs break automatically.

Author Information

Contributors
First Name and Middle Initial * First or given name, e.g. 'Peter'. Last Name * Your last, or family, name, e.g. 'MacMoody'. Email Address * Your email address, e.g. higgs-boson@gmail.com Occupation * Your role and/or occupation, e.g. 'Orthopedic Surgeon'. Affiliation * Your organization or institution (if applicable), e.g. 'Royal Free Hospital'.

Statement of Competing Interests

Competing interests? *

Yes

Please describe the competing interests

Vertical Tabs

Jump to comment:

No eLetters have been published for this article.

PreviousNext

In this issue

American Journal of Neuroradiology

Vol. 44, Issue 9

1 Sep 2023

Table of Contents
Index by author
Complete Issue (PDF)

Download PDF

Email Article

Thank you for your interest in spreading the word on American Journal of Neuroradiology.

NOTE: We only request your email address so that the person you are recommending the page to knows that you wanted them to see it, and that it is not junk mail. We do not capture any email address.

Your Email *

Your Name *

Send To *

Enter multiple addresses on separate lines or separate them with commas.

You are going to email the following Deep Learning Segmentation of the Nucleus Basalis of Meynert on 3T MRI

Message Subject (Your Name) has sent you a message from American Journal of Neuroradiology

Message Body (Your Name) thought you would like to see the American Journal of Neuroradiology web site.

Your Personal Message

CAPTCHA

This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.

Cite this article

D.J. Doss, G.W. Johnson, S. Narasimhan, J.S. Shless, J.W. Jiang, H.F.J. González, D.L. Paulo, A. Lucas, K.A. Davis, C. Chang, V.L. Morgan, C. Constantinidis, B.M. Dawant, D.J. Englot

Deep Learning Segmentation of the Nucleus Basalis of Meynert on 3T MRI

American Journal of Neuroradiology Sep 2023, 44 (9) 1020-1025; DOI: 10.3174/ajnr.A7950

Citation Manager Formats

BibTeX
Bookends
EasyBib
EndNote (tagged)
EndNote 8 (xml)
Medlars
Mendeley
Papers
RefWorks Tagged
Ref Manager
RIS
Zotero

0 Responses

Respond to this article

Bookmark this article

User Name *

Password *

Remember my user name & password.

Deep Learning for Nucleus Basalis Segmentation

D.J. Doss, G.W. Johnson, S. Narasimhan, J.S. Shless, J.W. Jiang, H.F.J. González, D.L. Paulo, A. Lucas, K.A. Davis, C. Chang, V.L. Morgan, C. Constantinidis, B.M. Dawant, D.J. Englot

American Journal of Neuroradiology Sep 2023, 44 (9) 1020-1025; DOI: 10.3174/ajnr.A7950

Share This Article:

Tweet Widget
Facebook Like
Google Plus One

Purchase

Jump to section

Article
Figures & Data
Supplemental
Info & Metrics
Responses
References
PDF

PubMed
Google Scholar

Cited By...

Deep Learning-Based Algorithm for Automatic Quantification of Nigrosome-1 and Parkinsonism Classification Using Susceptibility Map-Weighted MRI
Multimodal state-dependent connectivity analysis of arousal and autonomic centers in the brainstem and basal forebrain

Crossref (5)
Google Scholar

This article has been cited by the following articles in journals that are participating in Crossref Cited-by Linking.

Network signatures define consciousness state during focal seizures

Derek J. Doss, Graham W. Johnson, Ghassan S. Makhoul, Rohan V. Rashingkar, Jared S. Shless, Camden E. Bibro, Danika L. Paulo, Abhijeet Gummadavelli, Tyler J. Ball, Shilpa B. Reddy, Robert P. Naftel, Kevin F. Haas, Benoit M. Dawant, Christos Constantinidis, Shawniqua Williams Roberson, Sarah K. Bick, Victoria L. Morgan, Dario J. Englot

Epilepsia 2024 65 9
An individualized tractography pipeline for the nucleus basalis of Meynert lateral tract

Rachel A. Crockett, Kevin B. Wilkins, Michael M. Zeineh, Jennifer A. McNab, Jaimie M. Henderson, Vivek P. Buch, Helen M. Brontë-Stewart

Imaging Neuroscience 2024 2
Deep Learning–Based Algorithm for Automatic Quantification of Nigrosome-1 and Parkinsonism Classification Using Susceptibility Map–Weighted MRI

Pae Sun Suh, Hwan Heo, Chong Hyun Suh, MyeongOh Lee, Soohwa Song, Donghoon Shin, Sungyang Jo, Sun Ju Chung, Hwon Heo, Woo Hyun Shim, Ho Sung Kim, Sang Joon Kim, Eung Yeop Kim

American Journal of Neuroradiology 2024
Effects of strategic white matter hyperintensities of cholinergic pathways on basal forebrain volume in patients with amyloid-negative neurocognitive disorders

Ye Eun Kim, Jae-Sung Lim, Chong Hyun Suh, Hwon Heo, Jee Hoon Roh, E-nae Cheong, Yoojin Lee, Jae Woo Kim, Jae-Hong Lee

Alzheimer's Research & Therapy 2024 16 1
Fully automated segmentation and volumetric measurement of ocular adnexal lymphoma by deep learning-based self-configuring nnU-net on multi-sequence MRI: a multi-center study

Guorong Wang, Bingbing Yang, Xiaoxia Qu, Jian Guo, Yongheng Luo, Xiaoquan Xu, Feiyun Wu, Xiaoxue Fan, Yang Hou, Song Tian, Sicong Huang, Junfang Xian

Neuroradiology 2024 66 10

Main menu

User menu

Search

American Journal of Neuroradiology

Deep Learning Segmentation of the Nucleus Basalis of Meynert on 3T MRI

Plain text

Vertical Tabs

Jump to comment:

In this issue

Citation Manager Formats

Related Articles

Cited By...

More in this TOC Section

Similar Articles

Indexed Content

Cases

Special Collections

Resources

Multimedia

About Us

American Society of Neuroradiology